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RAPID - Ratio based Algorithm for Polypeptide Isotopic cluster Determination ( Software download )
RAPID is a command-line program to determine isotopic clusters and their monoisotopic masses based on a new probabilistic model. It determines monoisotopic masses of peptides, especially peptides of mass < 5000 Da. RAPID takes the Thermo Finnigan RAW and mzXML file formats as input. It automatically processes all the MS scans of multiple RAW flies. The results are published in a table format similar to that of ICR-2LS or Decon2LS.
 
Publication
   Isotopic Peak Intensity Ratio based Algorithm for Fast and Accurate Determination of Isotopic Clusters and
   Monoisotopic Masses of Polypeptides from High Resolution Mass Spectrometric Data

   Kunsoo Park, Joo Young Yoon, Sunho Lee, Eunok Paek, Heejin Park, Hee-Jung Jung, and Sang-Won Lee.
   Analytical Chemistry, 2008, 80(19), 7294-7303. [ PMID: 18754627 ]
Copyright © 2012 Bioinformatics & Intelligent Systems Lab, Hanyang University, Korea. All rights reserved.
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